Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106948609Forkhead box F2a. (376 aa)    
Predicted Functional Partners:
nkx3-2
NK3 homeobox 2.
   
 0.604
LOC106956268
Homeobox domain-containing protein.
   
 
 0.596
hoxb6
Homeobox B6a.
   
 
 0.596
gata5
GATA binding protein 5.
    
 0.572
gata4
GATA binding protein 4.
    
 0.572
gata6
GATA binding protein 6.
    
 0.572
nkx2-5
NK2 homeobox 5.
    
 0.571
barx1
BARX homeobox 1.
    
 
 0.519
pfdn2
Prefoldin subunit 2.
    
   0.512
ENSPLAP00000003478
Uncharacterized protein.
    
   0.512
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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