STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106948609Forkhead box F2a. (376 aa)    
Predicted Functional Partners:
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.626
suox
Sulfite oxidase.
     
 0.621
sting1
Transmembrane protein 173.
    
  0.617
crebbp
CREB binding protein a.
    
 0.530
LOC106942609
CREB binding protein b.
    
 0.530
LOC106939276
Centromere protein P.
    
 0.530
ENSPLAP00000013662
E1A binding protein p300 b.
    
 0.530
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.527
ENSPLAP00000028939
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
    
  0.527
gata5
GATA binding protein 5.
    
 0.518
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.