STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001148PDZ domain-containing protein. (209 aa)    
Predicted Functional Partners:
LOC106945532
Si:ch73-335l21.4.
   
 0.881
LOC106958363
Discs, large (Drosophila) homolog-associated protein 3.
    
 0.825
dlgap2
Discs, large (Drosophila) homolog-associated protein 2a.
    
 0.825
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
    
 0.825
LOC106954744
Discs, large (Drosophila) homolog-associated protein 4b.
    
 0.825
LOC106962735
Discs, large (Drosophila) homolog-associated protein 2b.
    
 0.825
DLGAP4
DLG associated protein 4.
    
 0.825
dlgap1
Discs, large (Drosophila) homolog-associated protein 1b.
    
 0.825
LOC106941356
Uncharacterized protein.
    
 0.825
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.795
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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