Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106942091Ceramide transporter 1b. (564 aa)    
Predicted Functional Partners:
LOC106953035
Casein kinase 1 gamma 2; Belongs to the protein kinase superfamily.
    
 0.802
LOC106936641
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.802
LOC106960637
Casein kinase 1, gamma 1; Belongs to the protein kinase superfamily.
    
 0.802
LOC106943850
Motile sperm domain containing 2.
    
 
 0.777
LOC106935927
Ran GTPase activating protein 1b.
    
   0.740
rangap1
RAN GTPase activating protein 1a.
    
   0.740
LOC106941691
PPP1R35_C domain-containing protein.
      
 0.680
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 0.658
LOC106960241
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 0.658
nudcd3
NudC domain containing 3.
      
 0.645
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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