Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106948605Uncharacterized protein. (347 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
   
   0.533
ENSPLAP00000004560
Ig-like domain-containing protein.
  
 
   0.510
ENSPLAP00000010183
Uncharacterized protein.
    
   0.504
LOC106942517
Uncharacterized protein.
    
   0.504
ENSPLAP00000021729
Uncharacterized protein.
    
   0.504
nme7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
    
   0.504
ENSPLAP00000025226
PARK2 co-regulated.
    
   0.504
sdhaf2
Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SDHA of the SDH catalytic dimer.
    
   0.501
LOC106935146
Uncharacterized protein.
  
 
 0.499
hgfac
HGF activator.
    
 0.497
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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