STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001163Uncharacterized protein. (196 aa)    
Predicted Functional Partners:
ENSPLAP00000001173
Uncharacterized protein.
 
  
 0.877
rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
    
 0.864
LOC106950546
Rap guanine nucleotide exchange factor (GEF) 6.
    
 0.864
LOC106937380
Rap guanine nucleotide exchange factor (GEF) 2.
    
 0.864
LOC106953978
Uncharacterized protein.
  
 0.855
UCKL1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
  
 0.855
LOC106963833
Junction plakoglobin a.
  
 0.855
LOC106954308
Uridine-cytidine kinase; Belongs to the uridine kinase family.
  
 0.855
LOC106941617
Uridine-cytidine kinase; Belongs to the uridine kinase family.
  
 0.855
LOC106936231
Uridine-cytidine kinase; Belongs to the uridine kinase family.
  
 0.855
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.