Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106964075Stromal antigen 2b. (1160 aa)    
Predicted Functional Partners:
smc3
Structural maintenance of chromosomes protein.
   
 0.990
smc1a
Structural maintenance of chromosomes protein.
   
 0.986
LOC106952458
Structural maintenance of chromosomes protein.
   
 0.986
LOC106953581
RAD21 cohesin complex component a.
   
 0.968
LOC106958854
RAD21 cohesin complex component b.
   
 0.968
LOC106964826
RAD21 cohesin complex component like 1.
   
 0.968
ENSPLAP00000005009
Rad21_Rec8_N domain-containing protein.
   
 0.928
pds5b
PDS5 cohesin associated factor B.
   
 0.890
pds5a
PDS5 cohesin associated factor A.
   
 0.890
LOC106957630
WAPL cohesin release factor b.
   
 0.828
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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