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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aipPeptidylprolyl isomerase. (341 aa)    
Predicted Functional Partners:
LOC106961916
Aryl hydrocarbon receptor 2.
    
 0.899
LOC106951192
Uncharacterized protein.
    
 0.899
LOC106942468
Heat shock protein 90, alpha (cytosolic), class B member 1.
    
 0.857
LOC106955542
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
    
 0.851
LOC106955541
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
    
 0.851
LOC106936503
Uncharacterized protein.
    
 0.836
ptges3
Prostaglandin E synthase 3b (cytosolic).
    
 0.826
LOC106950875
Prostaglandin E synthase 3a (cytosolic).
    
 0.826
LOC106961921
Aryl hydrocarbon receptor 1b.
    
 0.819
LOC106936504
Uncharacterized protein.
    
 0.819
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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