STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem134Transmembrane protein 134. (207 aa)    
Predicted Functional Partners:
UBXN4
UBX domain protein 4.
    
   0.511
LOC106946653
Ring finger protein 170.
      
 0.485
ENSPLAP00000031646
Protein phosphatase, Mg2+/Mn2+ dependent, 1E.
      
 0.482
ptrh1
Peptidyl-tRNA hydrolase 1 homolog.
      
 0.432
ENSPLAP00000014270
Uncharacterized protein.
      
 0.422
LOC106935499
Uncharacterized protein.
      
 0.420
fam185a
Family with sequence similarity 185 member A.
      
 0.418
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.