Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106937607Si:ch211-191a24.4. (289 aa)    
Predicted Functional Partners:
LOC106958444
MARVEL domain containing 3.
 
   
 
0.900
mal2
Mal, T cell differentiation protein 2 (gene/pseudogene).
      
 0.671
LOC106953472
Rhotekin 2a.
      
 0.521
rtkn
Rhotekin.
      
 0.521
ebp
EBP cholestenol delta-isomerase.
      
 0.511
ENSPLAP00000022041
EF-hand domain (C-terminal) containing 2.
      
 0.504
LOC106936933
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.422
LOC106947459
Occludin a.
      
 0.412
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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