Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106951220Synaptic vesicle glycoprotein 2. (426 aa)    
Predicted Functional Partners:
lamc1
Laminin, gamma 1.
     
 0.684
LOC106951719
Laminin, gamma 3.
     
 0.684
lamb1
Laminin, beta 1a.
     
 0.679
ENSPLAP00000030043
Uncharacterized protein.
     
 0.679
lama4
Laminin, alpha 4.
     
 0.668
ENSPLAP00000000681
Laminin, alpha 5.
     
 0.668
ENSPLAP00000010328
Uncharacterized protein.
     
 0.668
LOC106955924
Laminin, beta 1b.
     
 0.663
LOC106964883
Laminin, beta 2-like.
     
 0.663
ENSPLAP00000003645
ZPR1 zinc finger.
      
 0.660
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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