Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106938112Uncharacterized protein. (721 aa)    
Predicted Functional Partners:
LOC106945546
RELT like 1.
     
 
0.900
LOC106964411
Protein kinase domain-containing protein.
    
 
 0.552
strada
STE20 related adaptor alpha.
    
 
 0.552
stk39
Serine threonine kinase 39.
    
 
 0.552
LOC106948895
Oxidative stress responsive kinase 1b.
    
 
 0.552
LOC106934658
Oxidative stress responsive kinase 1a.
    
 
 0.552
elp2
Elongator acetyltransferase complex subunit 2.
    
 
 0.535
thg1l
tRNA(His) guanylyltransferase; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.
      
 0.510
LOC106964026
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
      
 0.489
u2af2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
      
 0.489
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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