STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106947357Double C2-like domains, delta. (421 aa)    
Predicted Functional Partners:
RAB27B
RAB27B, member RAS oncogene family.
    
 
 0.592
LOC106952996
Uncharacterized protein.
    
 
 0.592
rab27a
RAB27A, member RAS oncogene family.
    
 
 0.592
LOC106952696
Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.532
atf7ip
Activating transcription factor 7 interacting protein.
      
 0.529
cebpz
CCAAT enhancer binding protein zeta.
    
 
 0.458
LOC106961669
Uncharacterized protein.
      
 0.432
doc2a
Uncharacterized protein.
      
 0.432
ENSPLAP00000014463
C2 domain-containing protein.
      
 0.432
ENSPLAP00000028639
C2 domain-containing protein.
      
 0.432
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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