STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dennd5aDENN/MADD domain containing 5A. (1295 aa)    
Predicted Functional Partners:
madd
MAP-kinase activating death domain.
    
 
 0.776
LOC106946062
UDENN domain-containing protein.
    
 
 0.744
dennd3
DENN/MADD domain containing 3a.
    
 
 0.744
rab28
Uncharacterized protein.
     
 0.729
itfg1
Integrin alpha FG-GAP repeat containing 1.
      
 0.716
zmat4
Zinc finger, matrin-type 4b.
      
 0.683
LOC106955180
Zgc:171482.
      
 0.683
ENSPLAP00000007354
AVL9 homolog (S. cerevisiase).
      
 0.682
egfl6
EGF-like-domain, multiple 6.
      
 0.680
krcc1
C2H2-type domain-containing protein.
      
 0.645
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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