STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001223Ankyrin repeat domain 28b. (959 aa)    
Predicted Functional Partners:
PPP6C
Serine/threonine-protein phosphatase.
   
 0.769
LOC106956189
Serine/threonine-protein phosphatase.
   
 0.769
LOC106937823
Uncharacterized protein.
    
 0.709
ppp6r2
Protein phosphatase 6, regulatory subunit 2b.
    
 0.709
ppp6r3
Protein phosphatase 6, regulatory subunit 3.
    
 0.709
crk
CRK proto-oncogene, adaptor protein.
    
 0.688
ift81
Intraflagellar transport 81 homolog.
    
 0.670
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.662
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.643
LOC106938010
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
 0.600
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.