Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106951216WD repeat domain 61. (305 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.999
cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
    
 0.999
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.999
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.999
skiv2l
SKI2 homolog, superkiller viralicidic activity 2-like.
    
 0.998
ttc37
Tetratricopeptide repeat domain 37.
   
 0.998
rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.996
hbs1l
HBS1-like translational GTPase.
    
 0.981
spo11
SPO11 initiator of meiotic double stranded breaks.
    
 
 0.963
ttc33
Tetratricopeptide repeat domain 33.
    
  0.957
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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