Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
chrngCholinergic receptor, nicotinic, gamma. (509 aa)    
Predicted Functional Partners:
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
   
0.818
rapsn
Receptor-associated protein of the synapse, 43kD.
   
 
 0.777
LOC106961694
Cholinergic receptor, nicotinic, beta polypeptide 3a.
    
 0.727
LOC106943489
Cholinergic receptor, nicotinic, alpha 5.
    
 0.727
ENSPLAP00000017934
Cholinergic receptor, nicotinic, beta 3b (neuronal).
    
 0.727
ENSPLAP00000003814
Cholinergic receptor, nicotinic, alpha 4b.
    
  0.723
LOC106934682
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
    
  0.723
ENSPLAP00000025622
Neur_chan_LBD domain-containing protein.
    
  0.723
DOK7
Docking protein 7.
      
 0.682
LYPD6
LY6/PLAUR domain containing 6.
    
  0.678
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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