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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106939649Nuclear receptor coactivator 3. (1536 aa)    
Predicted Functional Partners:
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.904
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
    
 0.852
LOC106947837
Nuclear receptor subfamily 1, group H, member 5.
    
 0.852
ENSPLAP00000013662
E1A binding protein p300 b.
   
 0.840
crebbp
CREB binding protein a.
   
 0.835
LOC106942609
CREB binding protein b.
   
 0.835
carm1
Coactivator-associated arginine methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.833
LOC106951907
Retinoid X receptor, alpha a.
   
 0.830
RXRB
Retinoid X receptor beta.
   
 0.830
LOC106963931
Uncharacterized protein.
   
 0.830
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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