Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem9bTMEM9 domain family, member B. (188 aa)    
Predicted Functional Partners:
wwc3
WWC family member 3.
    
 
 0.729
LOC106964784
Chloride channel protein.
    
 
 0.729
clcn3
Chloride channel protein.
    
 
 0.729
clcn4
Chloride channel protein.
    
 
 0.729
wwc1
WW and C2 domain containing 1.
    
 
 0.729
tmem53
Transmembrane protein 53.
      
 0.684
LOC106940142
D-aminoacyl-tRNA deacylase 2.
      
 0.656
tmem214
Transmembrane protein 214.
      
 0.641
rbm42
RNA binding motif protein 42.
      
 0.639
tm9sf2
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.639
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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