Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC106959943Zgc:175280. (587 aa)    
Predicted Functional Partners:
oip5
Mis18 domain-containing protein.
      
 0.650
ENSPLAP00000023432
2-epi-5-epi-valiolone synthase.
   
 0.597
LOC106940816
Si:ch211-153b23.3.
   
 0.561
slc3a1
Solute carrier family 3 member 1.
  
 0.542
slc1a5
Amino acid transporter.
  
 
 0.533
slc1a4
Solute carrier family 1 member 4.
  
 
 0.533
pcsk2
Proprotein convertase subtilisin/kexin type 2; Belongs to the peptidase S8 family.
  
  
 0.529
egr2
Early growth response 2b.
    
 
 0.524
LOC106942793
Solute carrier family 7 member 10b.
  
 
 0.517
LOC106948654
GTP cyclohydrolase 2.
     
 0.511
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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