STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fem1cFem-1 homolog c (C. elegans). (618 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
 0.992
cul2
Cullin 2; Belongs to the cullin family.
    
 0.914
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.846
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.781
ELOB
Elongin B.
    
 0.734
LOC106961099
Elongin B.
    
 0.734
cops5
COP9 signalosome subunit 5.
    
 0.711
rnf7
Ring finger protein 7.
    
 0.707
commd8
COMM domain containing 8.
   
  0.706
LOC106934764
NEDD8 ubiquitin like modifier.
    
  0.690
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.