STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106937469Transmembrane p24 trafficking protein 7. (213 aa)    
Predicted Functional Partners:
tmed2
Transmembrane p24 trafficking protein 2.
   
0.964
tmed10
Transmembrane p24 trafficking protein 10.
   
0.955
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.945
tmed9
Transmembrane p24 trafficking protein 9.
   
0.903
LOC106955716
Transmembrane p24 trafficking protein 4.
   
0.903
mrps35
Mitochondrial ribosomal protein S35.
   
 
 0.866
dap3
Death associated protein 3.
   
 
 0.861
mrps5
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
   0.861
LOC106937177
Interferon regulatory factor 3.
    
 0.860
LOC106939484
Interferon regulatory factor 3.
    
 0.860
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.