Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001268Uncharacterized protein. (158 aa)    
Predicted Functional Partners:
sf3a3
Splicing factor 3a, subunit 3.
   
 0.941
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.936
snrpd3
Small nuclear ribonucleoprotein Sm D3.
   
 0.935
sf3b3
Splicing factor 3b, subunit 3.
    
 0.928
snrpd2
Small nuclear ribonucleoprotein Sm D2.
   
 0.926
sf3b1
Splicing factor 3b, subunit 1.
   
 0.923
snrpg
Small nuclear ribonucleoprotein G.
   
 0.923
sf3a2
Splicing factor 3a, subunit 2.
    
 0.922
phf5a
PHD finger protein 5A.
   
 0.918
sf3a1
Splicing factor 3a, subunit 1.
   
 0.913
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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