Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cep162Uncharacterized protein. (966 aa)    
Predicted Functional Partners:
nek4
NIMA-related kinase 4.
    
   0.738
bbs7
Bardet-Biedl syndrome 7.
   
  
 0.690
ENSPLAP00000003465
Uncharacterized protein.
   
 
 0.670
ENSPLAP00000012719
Uncharacterized protein.
   
 
 0.670
LOC106961620
Uncharacterized protein.
   
 
 0.670
ENSPLAP00000027389
annotation not available
   
 
 0.670
fbf1
Uncharacterized protein.
    
 
 0.633
c2cd3
C2 domain containing 3 centriole elongation regulator.
    
 0.629
tmem67
Transmembrane protein 67.
      
 0.625
cep120
Centrosomal protein 120.
   
 
 0.618
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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