Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106947350DLC1 Rho GTPase activating protein. (1159 aa)    
Predicted Functional Partners:
ENSPLAP00000001297
Uncharacterized protein.
 
      0.723
tbcb
Tubulin folding cofactor B.
    
   0.710
LOC106964421
Ras homolog family member Ca.
   
 0.706
LOC106959654
Uncharacterized protein.
   
 0.706
LOC106965113
Uncharacterized protein.
   
 0.706
LOC106960333
Uncharacterized protein.
   
 0.706
LOC106960220
Uncharacterized protein.
   
 0.706
LOC106962714
Uncharacterized protein.
   
 0.706
RND3
Rho family GTPase 3a.
   
 0.705
LOC106942744
Rho-related GTP-binding protein RhoE.
   
 0.705
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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