Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
snrnp48Small nuclear ribonucleoprotein 48 (U11/U12). (288 aa)    
Predicted Functional Partners:
snrnp25
Small nuclear ribonucleoprotein 25.
    
 0.998
snrnp70
Small nuclear ribonucleoprotein 70 (U1).
   
 0.998
zmat5
Zinc finger, matrin-type 5.
    
 0.997
pdcd7
Uncharacterized protein.
    
 0.997
zrsr2
Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2.
    
 0.996
zcrb1
Zinc finger CCHC-type and RNA binding motif 1.
    
 0.989
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.983
ENSPLAP00000000084
Small nuclear ribonucleoprotein polypeptide F.
    
 0.982
snrpg
Small nuclear ribonucleoprotein G.
    
 0.971
snrpd2
Small nuclear ribonucleoprotein Sm D2.
    
 0.959
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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