Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
unklUnk like zinc finger. (812 aa)    
Predicted Functional Partners:
ino80c
INO80 complex subunit C.
      
 0.681
LOC106936137
Uncharacterized protein.
      
 0.672
dph1
2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2.
      
 0.623
mgat5
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.
      
 0.623
rps27a
Ribosomal protein S27a.
    
  0.613
rps9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
      
 0.559
LOC106937790
Glycoprotein M6Bb.
      
 0.553
gpm6b
Glycoprotein M6Ba.
      
 0.553
ube2c
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.541
usp9x
Ubiquitin specific peptidase 9; Belongs to the peptidase C19 family.
    
   0.541
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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