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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd83Ig-like domain-containing protein. (230 aa)    
Predicted Functional Partners:
jak1
Tyrosine-protein kinase.
   
  
 0.597
LOC106962807
CD40 molecule, TNF receptor superfamily member 5.
   
  
 0.569
ccr7
Chemokine (C-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family.
      
 0.553
LOC106955731
Ras-related GTP binding A.
      
 0.534
sdhc
Succinate dehydrogenase complex, subunit C, integral membrane protein.
      
 0.515
il10
Interleukin 10.
      
 0.514
LOC106945746
CD40 ligand; Belongs to the tumor necrosis factor family.
   
  
 0.507
TNFRSF11B
TNF receptor superfamily member 11b.
   
  
 0.505
ENSPLAP00000020413
Uncharacterized protein.
      
 0.495
LOC106955801
SCY domain-containing protein.
   
  
 0.487
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.