STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106942067Uncharacterized protein. (171 aa)    
Predicted Functional Partners:
drg1
Developmentally regulated GTP binding protein 1.
    
   0.887
pole2
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
   0.887
cs
Citrate synthase; Belongs to the citrate synthase family.
    
   0.887
LOC106955778
Ribonuclease P 21 subunit.
   
 
  0.819
LOC106943812
Developmentally regulated GTP binding protein 2.
    
   0.722
LOC106965212
Solute carrier family 25 member 6; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.722
slc25a4
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.722
LOC106958044
Si:dkey-178e17.1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.722
LOC106943464
Developmentally-regulated GTP-binding protein 2.
    
   0.722
LOC106936259
Solute carrier family 25 member 1a; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.722
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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