Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC106953289HEXIM P-TEFb complex subunit 1. (367 aa)    
Predicted Functional Partners:
larp7
La ribonucleoprotein domain family, member 7.
    
 
 0.988
cdk9
Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily.
    
 
 0.979
LOC106964943
Cyclin T1; Belongs to the cyclin family.
    
 
 0.966
srsf10
Serine and arginine rich splicing factor 10.
    
 
 0.954
LOC106960930
Methylphosphate capping enzyme.
    
 
 0.951
LOC106941577
Si:ch1073-157b13.1.
    
 
 0.951
aff4
AF4/FMR2 family, member 4.
    
 
 0.943
ENSPLAP00000014309
Cyclin N-terminal domain-containing protein.
    
 
 0.886
ccnt2
Cyclin T2; Belongs to the cyclin family.
    
 
 0.886
LOC106959059
Uncharacterized protein.
    
 
 0.866
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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