STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106953679TRIF-NTD domain-containing protein. (565 aa)    
Predicted Functional Partners:
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.992
tlr3
Toll-like receptor 3; Belongs to the Toll-like receptor family.
   
 0.981
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.980
irf7
Interferon regulatory factor 7.
    
 0.973
LOC106937177
Interferon regulatory factor 3.
    
 0.965
LOC106939484
Interferon regulatory factor 3.
    
 0.965
tmed2
Transmembrane p24 trafficking protein 2.
   
 0.964
tmed10
Transmembrane p24 trafficking protein 10.
   
 0.955
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.954
LOC106965283
Interleukin 1 receptor associated kinase 4.
   
 0.937
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.