Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC106953679TRIF-NTD domain-containing protein. (565 aa)    
Predicted Functional Partners:
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.998
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.994
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.984
irf7
Interferon regulatory factor 7.
     
 0.968
tlr3
Toll-like receptor 3; Belongs to the Toll-like receptor family.
    
 0.966
ENSPLAP00000027506
Si:ch211-66k16.27.
    
 0.960
tmed10
Transmembrane p24 trafficking protein 10.
   
 0.958
LOC106937177
Interferon regulatory factor 3.
    
 0.956
tmed2
Transmembrane p24 trafficking protein 2.
   
 0.956
LOC106965283
Interleukin 1 receptor associated kinase 4.
   
 0.947
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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