Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106942061Uncharacterized protein. (396 aa)    
Predicted Functional Partners:
wdr48
WD repeat domain 48b.
    
 0.939
wdr20
WD repeat domain 20a.
    
 0.796
LOC106956877
DM1 locus, WD repeat containing.
    
 0.796
LOC106955543
WD repeat domain 20b.
    
 0.796
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.726
rps27a
Ribosomal protein S27a.
    
  0.713
LOC106939331
Uncharacterized protein.
    
  0.694
AR
Androgen receptor.
    
  0.694
fancd2
FA complementation group D2.
    
 0.688
ENSPLAP00000015559
Ubiquitin-like domain-containing protein.
    
  0.668
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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