Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
arhgap23Rho GTPase activating protein 23a. (1689 aa)    
Predicted Functional Partners:
ccdc51
Coiled-coil domain containing 51.
      
 0.681
rhof
Ras homolog family member F.
    
  0.556
krtcap2
Keratinocyte associated protein 2.
      
 0.545
etf1
Eukaryotic translation termination factor 1b.
      
 0.543
LOC106937782
F-BAR domain-containing protein.
    
 0.534
fnbp1
Formin binding protein 1b.
    
 0.534
ENSPLAP00000009689
Uncharacterized protein.
    
 
 0.529
ccdc85c
Coiled-coil domain containing 85C.
    
 
 0.529
LOC106964421
Ras homolog family member Ca.
    
 0.506
LOC106959654
Uncharacterized protein.
    
 0.506
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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