Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001322Uncharacterized protein. (574 aa)    
Predicted Functional Partners:
topbp1
DNA topoisomerase II binding protein 1.
    
 
 0.972
mtbp
MDM2 binding protein.
   
 0.881
fbl
Fibrillarin.
   
 
 0.828
ccna2
Cyclin A2; Belongs to the cyclin family.
   
 0.789
ccna1
Cyclin A1; Belongs to the cyclin family.
   
 0.789
ndufs3
NADH:ubiquinone oxidoreductase core subunit S3; Belongs to the complex I 30 kDa subunit family.
   
   0.768
exo1
Exonuclease 1.
  
 0.753
fanci
FA complementation group I.
   
 
 0.749
espl1
Extra spindle pole bodies like 1, separase.
   
 
 0.747
cdc45
CDC45 cell division cycle 45 homolog (S. cerevisiae).
   
  
 0.741
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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