Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001323Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
   
 0.970
ENSPLAP00000022298
hGDE_N domain-containing protein.
   
 0.957
gys1
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.944
GYS2
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.944
stbd1
CBM20 domain-containing protein.
   
 
 0.853
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
   
 0.830
pold1
DNA polymerase.
    
 0.815
ENSPLAP00000001113
CBM21 domain-containing protein.
   
 0.767
ENSPLAP00000002531
Protein phosphatase 1, regulatory subunit 3Db.
   
 0.767
ENSPLAP00000005613
Protein phosphatase 1, regulatory subunit 3Da.
   
 0.767
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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