STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd44Ankyrin repeat domain 44. (981 aa)    
Predicted Functional Partners:
PPP6C
Serine/threonine-protein phosphatase.
   
 0.769
LOC106956189
Serine/threonine-protein phosphatase.
   
 0.769
LOC106937823
Uncharacterized protein.
    
 0.709
ppp6r2
Protein phosphatase 6, regulatory subunit 2b.
    
 0.709
ppp6r3
Protein phosphatase 6, regulatory subunit 3.
    
 0.709
ift81
Intraflagellar transport 81 homolog.
    
 0.670
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.662
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.643
LOC106938010
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
 0.600
relb
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
 0.600
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.