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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C8orf37Chromosome 8 open reading frame 37. (203 aa)    
Predicted Functional Partners:
aff4
AF4/FMR2 family, member 4.
      
 0.566
ptger3
Prostaglandin E receptor 3 (subtype EP3).
      
 0.551
atxn2
Ataxin 2.
      
 0.549
arl2bp
ADP-ribosylation factor-like 2 binding protein.
      
 0.548
ttc8
Tetratricopeptide repeat domain 8.
      
 0.546
LOC106948950
Uncharacterized protein.
      
 0.543
ift172
Intraflagellar transport 172.
      
 0.538
atxn10
Ataxin 10.
      
 0.495
LOC106959059
Uncharacterized protein.
      
 0.487
LOC106956257
LsmAD domain-containing protein.
      
 0.428
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.