STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106963390Syntaphilin b. (456 aa)    
Predicted Functional Partners:
ENSPLAP00000005009
Rad21_Rec8_N domain-containing protein.
 
   
  0.496
LOC106953581
RAD21 cohesin complex component a.
 
   
  0.489
LOC106958854
RAD21 cohesin complex component b.
 
   
  0.489
LOC106964826
RAD21 cohesin complex component like 1.
 
   
  0.489
cplx4
Complexin 4a.
      
 0.480
ntan1
Uncharacterized protein.
      
 0.452
TMEM82
Transmembrane protein 82.
      
 0.422
ENSPLAP00000019392
Transmembrane protein 82.
      
 0.422
LOC106964409
Trafficking protein, kinesin binding 2.
      
 0.420
gask1b
Golgi associated kinase 1B.
      
 0.412
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.