Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
lcmt2Leucine carboxyl methyltransferase 2. (701 aa)    
Predicted Functional Partners:
ppp4c
Serine/threonine-protein phosphatase.
   
 0.899
tyw5
tRNA-yW synthesizing protein 5.
 
    
 0.887
ptpa
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
    
 
 0.838
LOC106941149
Serine/threonine-protein phosphatase.
    
 0.834
ppp2ca
Serine/threonine-protein phosphatase.
    
 0.834
LOC106955401
Serine/threonine-protein phosphatase.
    
 0.834
rpusd2
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
      
 0.804
ENSPLAP00000007405
Fibrinogen C-terminal domain-containing protein.
    
   0.783
gda
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
    
 
 0.782
slc25a32
Solute carrier family 25 member 32b; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.776
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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