STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnfrsf21Tumor necrosis factor receptor superfamily, member 21. (594 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 
 0.754
LOC106940919
Amyloid beta (A4) precursor protein b.
    
 
 0.754
LOC106936788
Amyloid beta (A4) precursor-like protein 2.
    
 
 0.614
ENSPLAP00000029361
A4_EXTRA domain-containing protein.
    
 
 0.614
aplp1
Amyloid beta (A4) precursor-like protein 1.
    
 
 0.581
tradd
Tnfrsf1a-associated via death domain.
    
 
 0.572
podxl2
Uncharacterized protein.
    
 
 0.558
hhip
Hedgehog interacting protein.
    
 
 0.515
LOC106957747
Beta-1,3-N-acetylglucosaminyltransferase.
      
 0.491
pla2g4a
Phospholipase A2.
      
 0.491
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.