Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSPLAP00000001342Histone H3; Belongs to the histone H3 family. (102 aa)    
Predicted Functional Partners:
LOC106956949
Lysine (K)-specific demethylase 6A, like.
   
 0.885
kdm6a
Lysine (K)-specific demethylase 6A.
   
 0.885
LOC106949253
Lysine (K)-specific demethylase 6B, b.
   
 0.885
LOC106935492
Lysine (K)-specific demethylase 6B, a.
   
 0.885
arid4a
AT rich interactive domain 4A (RBP1-like).
   
 0.837
arid4b
Translocase of outer mitochondrial membrane 20.
   
 0.837
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
  0.818
rps27a
Ribosomal protein S27a.
   
 0.809
setd2
SET domain containing 2, histone lysine methyltransferase.
    
 0.809
ENSPLAP00000004554
ANK_REP_REGION domain-containing protein.
    
 0.796
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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