STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actr6Actin related protein 6; Belongs to the actin family. (396 aa)    
Predicted Functional Partners:
znhit1
Zinc finger, HIT-type containing 1.
   
 
 0.991
yeats4
YEATS domain containing 4.
   
 
 0.990
dmap1
DNA methyltransferase 1 associated protein 1.
    
 
 0.989
ruvbl2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 
 0.982
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 
 0.980
vps72
Vacuolar protein sorting 72 homolog a.
    
 
 0.959
cfdp1
Craniofacial development protein 1; May play a role during embryogenesis.
   
 
 0.945
ENSPLAP00000012461
Rad60-SLD domain-containing protein.
    
   0.937
srcap
Snf2-related CREBBP activator protein.
    
 
 0.921
ep400
E1A binding protein p400.
    
 
 0.921
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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