Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106948583SRY-box transcription factor 8a. (455 aa)    
Predicted Functional Partners:
dmrt2
Doublesex and mab-3 related transcription factor 2a.
    
 0.611
LOC106948175
POU domain protein.
    
 0.590
dmrt3
Doublesex and mab-3 related transcription factor 3a.
    
 0.463
LOC106962595
Uncharacterized protein.
    
 0.458
ENSPLAP00000008382
Uncharacterized protein.
    
 0.458
prdm4
PR domain containing 4.
    
 0.458
prdm5
Zinc finger protein.
    
 0.458
LOC106946190
Uncharacterized protein.
    
 0.458
ENSPLAP00000020078
Uncharacterized protein.
    
 0.458
ENSPLAP00000024328
Uncharacterized protein.
    
 0.458
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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