STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rgs3Si:ch211-154e10.1. (1002 aa)    
Predicted Functional Partners:
LOC106946560
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.776
LOC106949452
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.776
ENSPLAP00000008509
Ephrin-B3a.
    
 0.770
LOC106935973
Ephrin-B2a; Belongs to the ephrin family.
    
 0.770
ENSPLAP00000019789
Ephrin-B1; Belongs to the ephrin family.
    
 0.770
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
  0.769
LOC106947723
Guanine nucleotide binding protein (G protein), beta 5a.
   
 0.765
gnb5
Guanine nucleotide binding protein (G protein), beta 5b.
   
 0.765
ENSPLAP00000023963
Uncharacterized protein.
   
 0.765
LOC106955270
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.754
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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