Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106938085Uncharacterized protein. (119 aa)    
Predicted Functional Partners:
LOC106941582
Si:ch211-261p9.4.
 
     0.704
LOC106958596
Uncharacterized protein.
      
 0.629
ZNF654
Zinc finger protein 654.
      
 0.629
thoc3
THO complex 3.
      
 0.517
dnajb1
DnaJ heat shock protein family (Hsp40) member B1b.
    
   0.513
LOC106963587
DnaJ heat shock protein family (Hsp40) member B1a.
    
   0.513
dnajb13
DnaJ heat shock protein family (Hsp40) member B13.
    
   0.513
dnajb4
DnaJ heat shock protein family (Hsp40) member B4.
    
   0.513
dnajb5
J domain-containing protein.
    
   0.435
ENSPLAP00000023380
Zgc:122979.
    
   0.435
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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