Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001374Histone H2B; Belongs to the histone H2B family. (113 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
 0.874
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.821
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.821
LOC106946374
Histone H2A; Belongs to the histone H2A family.
  
 0.820
LOC106957204
Histone H2A; Belongs to the histone H2A family.
  
 0.818
ENSPLAP00000003362
Histone H2A; Belongs to the histone H2A family.
  
 0.818
LOC106945497
Histone H2A-like.
  
 0.818
ENSPLAP00000030193
Histone H2A; Belongs to the histone H2A family.
  
 0.818
LOC106963507
Histone H2A; Belongs to the histone H2A family.
  
 0.817
ENSPLAP00000020831
Histone H2A; Belongs to the histone H2A family.
  
 0.816
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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