STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spryd4SPRY domain containing 4. (224 aa)    
Predicted Functional Partners:
tmem192
Transmembrane protein 192.
   
  0.791
gtpbp8
GTP binding protein 8 (putative).
   
  
 0.563
ankrd46
Ankyrin repeat domain 46b.
    
 0.531
yeats4
YEATS domain containing 4.
      
 0.525
dhodh
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
   
    0.438
zfand4
Zinc finger, AN1-type domain 4.
    
  0.424
LOC106964943
Cyclin T1; Belongs to the cyclin family.
    
 
 0.420
LOC106959972
Uncharacterized protein.
      
 0.418
LOC106959393
Uncharacterized protein.
      
 0.418
LOC106965067
Growth arrest-specific 7a.
    
  0.412
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.