STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apbb3Amyloid beta (A4) precursor protein-binding, family B, member 3. (338 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 0.857
LOC106940919
Amyloid beta (A4) precursor protein b.
    
 0.857
aplp1
Amyloid beta (A4) precursor-like protein 1.
    
 0.760
LOC106936788
Amyloid beta (A4) precursor-like protein 2.
    
 0.752
ENSPLAP00000029361
A4_EXTRA domain-containing protein.
    
 0.752
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
  
  0.678
ANKRD6
Ankyrin repeat domain 6.
    
 0.652
sh3pxd2b
SH3 and PX domains 2B.
     
 0.645
rad50
RAD50 homolog, double strand break repair protein.
   
 0.643
nbn
Nibrin.
    
  0.641
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.