Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
rpl34
Ribosomal protein L34.
  
 0.998
rpl35
Ribosomal protein L35.
  
 0.998
LOC106955741
Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.998
rpl15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
  
 0.998
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.998
rpl7
Ribosomal protein L7.
  
 0.998
rpl21
Ribosomal protein L21.
   
 0.998
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
 0.998
rpl23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.998
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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