STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106947336Glutamate receptor interacting protein 2b. (960 aa)    
Predicted Functional Partners:
pick1
Protein interacting with prkca 1.
    
 0.809
LOC106954491
Uncharacterized protein.
    
 0.739
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.739
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.707
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.706
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.705
ift172
Intraflagellar transport 172.
    
 0.702
ift88
Intraflagellar transport 88 homolog.
    
 0.695
ENSPLAP00000024276
Protein kinase domain-containing protein.
    
 0.688
grip1
Glutamate receptor interacting protein 1.
  
 
 
0.688
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.