STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sra1SRA1 domain-containing protein. (252 aa)    
Predicted Functional Partners:
KCNIP1
Potassium voltage-gated channel interacting protein 1.
      
 0.590
dcp1a
Decapping mRNA 1A.
      
 0.548
tmem245
Transmembrane protein 245.
      
 0.522
sec24c
SEC24 homolog C, COPII coat complex component.
    
   0.514
bag3
BCL2 associated athanogene 3.
      
 0.506
ENSPLAP00000002655
Uncharacterized protein.
      
 0.505
sec24d
SEC24 homolog D, COPII coat complex component.
    
   0.487
dcp1b
Decapping mRNA 1B.
      
 0.482
LOC106963973
D site albumin promoter binding protein b.
    
 
 0.461
ube2l3
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.461
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.